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author | David Robillard <d@drobilla.net> | 2019-03-17 17:31:05 +0100 |
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committer | David Robillard <d@drobilla.net> | 2019-03-17 17:31:05 +0100 |
commit | 406f89271452fdb573c7e28113b1ed08ff2b4eda (patch) | |
tree | d2dcbaf61f3749f73dc7a5e10d3fc6cd5e6e129a /waflib/extras/run_r_script.py | |
parent | 7983a5aae615290d04fd43cbc2752f8cf4a46d10 (diff) | |
download | suil-406f89271452fdb573c7e28113b1ed08ff2b4eda.tar.gz suil-406f89271452fdb573c7e28113b1ed08ff2b4eda.tar.bz2 suil-406f89271452fdb573c7e28113b1ed08ff2b4eda.zip |
Squashed 'waflib/' changes from 915dcb1..e7a29b6
e7a29b6 Upgrade to waf 2.0.15
8280f9d Add command for running executables from the build directory
8073c1a Make make_simple_dox() safe in case of exception
70d03b8 Avoid use of global counter hacks for configuration display
b7d689a Rewrite test framework
94deadf Automatically add options and move add_flags() to options context
f4259ee Reduce system include path noise
927b608 Automatically display configuration header
c44b8f3 Set line justification from a constant in the wscript
a48e26f Automatically detect if wscript has a test hook
ef66724 Save runtime variables in the environment
63bcbcd Clean up TestContext
b1d9505 Add ExecutionContext for setting runtime environment
387c1df Add show_diff() and test_file_equals() utilities
29d4d29 Fix in-tree library paths
9fde01f Add custom configuration context
6d3612f Add lib_path_name constant
git-subtree-dir: waflib
git-subtree-split: e7a29b6b9b2f842314244c23c14d8f8f560904e1
Diffstat (limited to 'waflib/extras/run_r_script.py')
-rw-r--r-- | waflib/extras/run_r_script.py | 86 |
1 files changed, 0 insertions, 86 deletions
diff --git a/waflib/extras/run_r_script.py b/waflib/extras/run_r_script.py deleted file mode 100644 index b0d8f2b..0000000 --- a/waflib/extras/run_r_script.py +++ /dev/null @@ -1,86 +0,0 @@ -#!/usr/bin/env python -# encoding: utf-8 -# Hans-Martin von Gaudecker, 2012 - -""" -Run a R script in the directory specified by **ctx.bldnode**. - -For error-catching purposes, keep an own log-file that is destroyed if the -task finished without error. If not, it will show up as rscript_[index].log -in the bldnode directory. - -Usage:: - - ctx(features='run_r_script', - source='some_script.r', - target=['some_table.tex', 'some_figure.eps'], - deps='some_data.csv') -""" - - -import os, sys -from waflib import Task, TaskGen, Logs - -R_COMMANDS = ['RTerm', 'R', 'r'] - -def configure(ctx): - ctx.find_program(R_COMMANDS, var='RCMD', errmsg = """\n -No R executable found!\n\n -If R is needed:\n - 1) Check the settings of your system path. - 2) Note we are looking for R executables called: %s - If yours has a different name, please report to hmgaudecker [at] gmail\n -Else:\n - Do not load the 'run_r_script' tool in the main wscript.\n\n""" % R_COMMANDS) - ctx.env.RFLAGS = 'CMD BATCH --slave' - -class run_r_script_base(Task.Task): - """Run a R script.""" - run_str = '"${RCMD}" ${RFLAGS} "${SRC[0].abspath()}" "${LOGFILEPATH}"' - shell = True - -class run_r_script(run_r_script_base): - """Erase the R overall log file if everything went okay, else raise an - error and print its 10 last lines. - """ - def run(self): - ret = run_r_script_base.run(self) - logfile = self.env.LOGFILEPATH - if ret: - mode = 'r' - if sys.version_info.major >= 3: - mode = 'rb' - with open(logfile, mode=mode) as f: - tail = f.readlines()[-10:] - Logs.error("""Running R on %r returned the error %r\n\nCheck the log file %s, last 10 lines\n\n%s\n\n\n""", - self.inputs[0], ret, logfile, '\n'.join(tail)) - else: - os.remove(logfile) - return ret - - -@TaskGen.feature('run_r_script') -@TaskGen.before_method('process_source') -def apply_run_r_script(tg): - """Task generator customising the options etc. to call R in batch - mode for running a R script. - """ - - # Convert sources and targets to nodes - src_node = tg.path.find_resource(tg.source) - tgt_nodes = [tg.path.find_or_declare(t) for t in tg.to_list(tg.target)] - - tsk = tg.create_task('run_r_script', src=src_node, tgt=tgt_nodes) - tsk.env.LOGFILEPATH = os.path.join(tg.bld.bldnode.abspath(), '%s_%d.log' % (os.path.splitext(src_node.name)[0], tg.idx)) - - # dependencies (if the attribute 'deps' changes, trigger a recompilation) - for x in tg.to_list(getattr(tg, 'deps', [])): - node = tg.path.find_resource(x) - if not node: - tg.bld.fatal('Could not find dependency %r for running %r' % (x, src_node.abspath())) - tsk.dep_nodes.append(node) - Logs.debug('deps: found dependencies %r for running %r', tsk.dep_nodes, src_node.abspath()) - - # Bypass the execution of process_source by setting the source to an empty list - tg.source = [] - |